College of Plant Protection: Plant Protection (direction of pest management), Plant Protection (direction of inspection and quarantine), Pharmaceutical Engineering, Biosafety)

College of Horticulture: Horticulture, Tea Science, Facility Agriculture Science and Engineering (Urban Agriculture Direction)

Forestry college: forestry, resources and environment and urban and rural planning and management, ecology, soil and water conservation and desertification control, forest resources protection and recreation, statistics.

School of Life Sciences: major in biological science (national science base class of biology), biological science, biotechnology, bioinformatics and bioengineering.

College of Animal Science: Animal Science, Animal Medicine and Aquaculture.

Bee research institute: bee research, resources and development of traditional Chinese medicine.

College of Resources and Environment: major in land resources management, environmental engineering, agricultural resources and environment, spatial information and digital technology.

College of Food Science: Food Science and Engineering, Food Quality and Safety.

School of Materials Engineering: major in materials science and engineering, wood science and engineering, light chemical industry, chemical engineering and technology.

School of Computer and Information: electronic information engineering, computer science and technology, software engineering, information and computing science, mathematics and applied mathematics, network engineering.

School of Mechanical and Electrical Engineering: major in mechanical design, manufacturing and automation (direction of mechanical and electronic engineering), mechanical design, manufacturing and automation (direction of modern design and manufacturing engineering), vehicle engineering, electrical engineering and automation, electronic science and technology and industrial engineering.

Jiaotong University: major in forest engineering (direction of roads and bridges), civil engineering, traffic engineering, transportation, engineering management, urban planning and logistics management.

School of Economics and Management, Tourism College (joint office): major in finance, international economy and trade, business administration, accounting, tourism management, agriculture and forestry economic management, administrative management and cultural industry management.

College of Humanities and Social Sciences: human resource management, public enterprise management (technical brokerage direction), public enterprise management (community management direction), public enterprise management (ethnic classes), English, labor and social security.

Art College and Landscape College (joint office): landscape architecture, landscape architecture, art design, advertising and animation.

Overseas Colleges: Horticulture (Sino-Canadian Cooperation Class), Agricultural Resources and Environment (Sino-Canadian Cooperation Class)

Jinshan College of Fujian Agriculture and Forestry University (Independent College)

Fujian Agriculture and Forestry University Oriental College (Independent College)

School of Software Engineering (Vocational College)