Wenzhou University has existing basic branches: Business School, Law and Politics College, Education College, Physical Education College, Humanities College, Foreign Languages College, Music College, Art and Art Design College, Mathematics and Information Science College, Physics and Electronic Information Engineering College (hereinafter referred to as Physics and Electricity College), Chemistry and Materials Engineering College, Life and Environmental Science College, Electromechanical Engineering College, Computer Science and Engineering College, architectural and civil engineering College, Fashion Institute, Adult (continued).

The school also has independent branches: City College and Oujiang College.

Affiliated institutions of the school: Institute of Organic and Medicinal Chemistry, Sino-Japanese Cultural Exchange Center, Leather Research Center, Korean Studies Research Center, Hair Embroidery Research Institute, Nano-Lab China Shoe Capital Information Center, and Nonlinear Analysis Institute.